Tightened up .gitignore such that we are no longer ignoring files that are actually in the tree.

Check for files that we are accidentally ignoring:

  git ls-files -i --exclude-standard | sed -e "s:.:\!\/\\0:"

Check for files that we might want to ignore:

  git ls-files -o --exclude-standard | sed -e "s:.:\/\\0:"

src/mod/.gitignore

@@ -1,5 +1,5 @@
-Makefile
-Makefile.in
+/Makefile
+/Makefile.in
 applications/mod_commands/Makefile
 applications/mod_conference/Makefile
 applications/mod_dptools/Makefile